nextflow scm源码
最后发布时间 : 2023-10-30 17:31:51
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nextflow可以使用(source code management, SCM)管理源代码。SCM的详细配置见这里
scm的使用方法如下：
nextflow clone https://gitee.com/bioproj/nf-hello
nextflow pull https://gitee.com/bioproj/nf-hello
执行入口nextflow.cli.CmdPull
log.info "Checking $it ..."
// nextflow 拉去代码
def manager = new AssetManager(it, this)
def result = manager.download(revision)
manager.updateModules()
def scriptFile = manager.getScriptFile()
String message = !result ? " done" : " $result"
message += " - revision: ${scriptFile.revisionInfo}"
log.info message