nextflow run 'https://github.com/nf-core/rnaseq' -name rnaseq_community-showcase_20230920_6cfd8b3f -params-file 'https://api.tower.nf/ephemeral/SroDaF1dJeIn6ijA4WlGMg.json' -with-tower -r 3.12.0 -profile test
For example, the following params file in YAML format:
alpha: 1 beta: 'foo'
Or in JSON format:
{ "alpha": 1, "beta": "foo" }
Is equivalent to this command in CLI:
$ nextflow run main.nf --alpha 1 --beta foo