obsidian & zotero

最后发布时间:2023-08-27 13:54:44 浏览量:

“where ARGs are typically identified or predicted based on the “best hits” of sequence searches against existing databases” (Arango-Argoty et al., 2018, p. 1) (pdf)

“where ARGs are typically identified or predicted based on the “best hits” of sequence searches against existing databases” (Arango-Argoty et al., 2018, p. 1) (pdf)

zotero install for ubuntu

Installation Instructions

https://github.com/MuiseDestiny/zotero-reference

解决obsidian不能跳转zotero

Getting zotero:// to work under Ubuntu/Linux [SOLVED]

ln -s /opt/zotero/zotero.desktop ~/.local/share/applications/zotero.desktop
 sudo update-desktop-database
xdg-mime default zotero.desktop x-scheme-handler/zotero

obsidian plugins

https://github.com/juqkai/obsidian-proxy-github
https://marcus.se.net/obsidian-plugin-docs/

cit

---
Type: {{entry.type}}
Authors: {{authorString}}
Year: {{year}}
Title: {{title}}
Journal: {{containerTitle}}
Pages: {{page}}
DOI: {{DOI}}
Publisher: {{publisher}}
Place: {{publisherPlace}}
---
#  {{title}}
[==*Read it now! See in Zotero*==]({{zoteroSelectURI}})
**Web:** [Open online]({{URL}})
**Citekey:** {{citekey}}
**Tags:** #source, (type), (status), (decade)

## Abstract
{{abstract}}

## Notes
{{note}}

## Summary
## Research Objective(s)
## Background / Problem Statement
## Method(s)
## Evaluation
## Conclusion
## Notes
## References

zotero plugin

图片alt

图片alt

zotero plugin develop

Zotero Plugin Development

https://www.mediawiki.org/wiki/Citoid/Creating_Zotero_translators

图片alt

图片alt

curl http://127.0.0.1:23119/better-bibtex/export/collection?/1/PY9XFCSQ.biblatex
// entry.add({ name: 'key', value: item.key});
//Zotero.debug(JSON.stringify(item))

if (Translator.BetterTeX && !Translator.options.exportFileData && item.attachments && item.attachments.length) {
  for (const att of item.attachments) {
    if (att.localPath) {
      att.localPath = att.localPath.replace(RegExp("^\/.*?\/.*?\/"), "~/")
    }
 if(att.key && att.contentType=="application/pdf"){
   entry.add({ name: 'attachment', value: 'zotero://open-pdf/library/items/'+att.key});
 }
  } 
//zotero://open-pdf/library/items/LHECWY5Q
  entry.add({ name: 'file', value: item.attachments, enc: 'attachments' })
  //return { cache: false }
}
{
    "key": "CB6BGBZ7", //zotero://select/library/items/CB6BGBZ7
    "version": 545,
    "itemType": "journalArticle",
    "title": "Characterization of Hypoxia-Related Molecular Subtypes in Clear Cell Renal Cell Carcinoma to Aid Immunotherapy and Targeted Therapy via Multi-Omics Analysis",
    "abstractNote": "Objective: Tumor hypoxia is a .....",
    "date": "2021",
    "language": "eng",
    "libraryCatalog": "PubMed",
    "extra": "",
    "volume": "8",
    "pages": "684050",
    "publicationTitle": "Frontiers in Molecular Biosciences",
    "DOI": "10.3389/fmolb.2021.684050",
    "journalAbbreviation": "Front Mol Biosci",
    "ISSN": "2296-889X",
    "creators": [
        {
            "firstName": "Weimin",
            "lastName": "Zhong",
            "creatorType": "author"
        }
    ],
    "tags": [
        {
            "tag": "hypoxia",
            "type": 1
        }
    ],
    "collections": [
        "PY9XFCSQ"
    ],
    "relations": {},
    "dateAdded": "2022-04-15T02:56:21Z",
    "dateModified": "2022-04-16T14:04:17Z",
    "uri": "http://zotero.org/users/8927145/items/CB6BGBZ7",
    "itemID": 471,
    "attachments": [
        {
            "key": "ZYR5ABU5",
            "version": 456,
            "itemType": "attachment",
            "title": "PubMed entry",
            "url": "http://www.ncbi.nlm.nih.gov/pubmed/34250018",
            "accessDate": "2022-04-15T02:56:24Z",
            "parentItem": "CB6BGBZ7",
            "linkMode": "linked_url",
            "contentType": "text/html",
            "charset": "",
            "tags": [],
            "relations": {},
            "dateAdded": "2022-04-15T02:56:24Z",
            "dateModified": "2022-04-15T02:56:24Z",
            "uri": "http://zotero.org/users/8927145/items/ZYR5ABU5"
        },
        {
            "key": "DEQHQZ6C", //zotero://select/library/items/DEQHQZ6C
            "version": 628,
            "itemType": "attachment",
            "title": "Zhong et al_2021_Characterization of Hypoxia-Related Molecular Subtypes in Clear Cell Renal Cell.pdf",
            "url": "https://www.frontiersin.org/articles/10.3389/fmolb.2021.684050/pdf",
            "accessDate": "2022-04-17T04:48:45Z",
            "parentItem": "CB6BGBZ7",
            "linkMode": "imported_url",
            "contentType": "application/pdf",
            "charset": "",
            "filename": "Zhong et al_2021_Characterization of Hypoxia-Related Molecular Subtypes in Clear Cell Renal Cell.pdf",
            "note": "",
            "tags": [],
            "relations": {},
            "dateAdded": "2022-04-17T04:48:45Z",
            "dateModified": "2022-04-17T04:48:46Z",
            "uri": "http://zotero.org/users/8927145/items/DEQHQZ6C",
            "localPath": "/home/wangyang/Zotero/storage/DEQHQZ6C/Zhong et al_2021_Characterization of Hypoxia-Related Molecular Subtypes in Clear Cell Renal Cell.pdf",
            "defaultPath": "files/523/Zhong et al_2021_Characterization of Hypoxia-Related Molecular Subtypes in Clear Cell Renal Cell.pdf"
        }
    ],
    "notes": [
        {
            "key": "UNFVZ4UK",  //zotero://select/library/items/UNFVZ4UK
            "version": 827,
            "itemType": "note",
            "parentItem": "CB6BGBZ7",
            "note": "",
            "tags": [],
            "relations": {},
            "dateAdded": "2022-04-19T04:18:47Z",
            "dateModified": "2022-04-19T04:18:47Z",
            "uri": "http://zotero.org/users/8927145/items/UNFVZ4UK"
        },
        {
            "key": "D7KUSDKB", //zotero://select/library/items/D7KUSDKB
            "version": 831, 
            "itemType": "note",
            "parentItem": "CB6BGBZ7",
            "note": "",
            "tags": [
                {
                    "tag": "hypoxia"
                }
            ],
            "relations": {},
            "dateAdded": "2022-04-15T03:04:07Z",
            "dateModified": "2022-04-19T04:57:07Z",
            "uri": "http://zotero.org/users/8927145/items/D7KUSDKB"
        }
    ],
    "citationKey": "zhongCharacterizationHypoxiaRelatedMolecular2021",
    "citekey": "zhongCharacterizationHypoxiaRelatedMolecular2021",
    "itemKey": "CB6BGBZ7",
    "libraryID": 1,
    "$cacheable": false,
    "extraFields": {
        "kv": {},
        "creator": {},
        "tex": {
            "pmid": {
                "value": "34250018"
            },
            "pmcid": {
                "value": "PMC8267011"
            }
        },
        "citationKey": "",
        "aliases": []
    },
    "raw": false,
    "edition": "",
    "arXiv": null
}
var item = ZoteroPane.getSelectedItems()[0];
var annotations = item.getAnnotations().filter(x => x.annotationType == 'image');
a = annotations.map(x => Zotero.Annotations.getCacheImagePath(x));
return a

https://forums.zotero.org/discussion/90753/zotero-beta-integration-with-external-note-taking-tools