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Literature
同步
16s
A_needRead
alignment
b_bulkRNA-seq
alternative splicing
assembly
bulkRNA-seq article
review
b_scRNA-seq
cell type annotation
cell-cell communication
immune cell
integration
regulatory information
scRNASeq-method
seurat
trajectory inference
book
Epigenetic
WGBS
lncRNA
machine learning
biology
Dimensionality reduction for biology
metagenomic
assembly
binning
db
Kraken
MetaPhlAn
Pathogen
zh
miRNA
mNGS
other
a_mendely
databases
immune
Macrophages
mutation
ncRNA
reading
report
temp
amplicon
course
metabolomics
method
microorganism
Prognostic Model
project
Quantification
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Cell Type Enrichment
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Transcriptomics Metabolomics
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Untitled
diet
Calling Somatic SNVs and Indels with Mutect2
The mutation spectrum revealed by paired genome sequences from a lung cancer patient
The landscape of somatic copy-number alteration across human cancers
The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data
Scaling accurate genetic variant discovery to tens of thousands of samples
Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants
Protocol for unbiased, consolidated variant calling from whole exome sequencing data
Mapping short DNA sequencing reads and calling variants using mapping quality scores
From FastQ data to high confidence variant calls: the Genome Analysis Toolkit best practices pipeline
Fast and accurate short read alignment with Burrows-Wheeler transform
Discovery and genotyping of genome structural polymorphism by sequencing on a population scale
Defining “mutation” and “polymorphism” in the era of personal genomics
Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data
Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization
Analysis of genetic inheritance in a family quartet by whole-genome sequencing
A universal SNP and small-indel variant caller using deep neural networks
A framework for variation discovery and genotyping using next-generation DNA sequencing data
A comprehensive catalogue of somatic mutations from a human cancer genome