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Literature 同步
  • 16s
  • A_needRead
  • alignment
  • b_bulkRNA-seq
    • alternative splicing
    • assembly
    • bulkRNA-seq article
    • review
  • b_scRNA-seq
    • cell type annotation
    • cell-cell communication
    • immune cell
    • integration
    • regulatory information
    • scRNASeq-method
    • seurat
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  • book
  • Epigenetic
    • WGBS
  • lncRNA
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    • biology
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  • metagenomic
    • assembly
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    • zh
  • miRNA
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    • a_mendely
      • databases
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      • 16S
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    • Transcriptomics Metabolomics
  • tools
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  • deep learning
  • bigdata
  • Untitled
  • diet
  • Tools for Sequence-Based miRNA Target Prediction: What to Choose?


  • TF2LncRNA: identifying common transcription factors for a list of lncRNA genes from ChIP-Seq data


  • rmda: Risk Model Decision Analysis


  • pROC: An open-source package for R and S+ to analyze and compare ROC curves


  • PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes


  • MultiQC: summarize analysis results for multiple tools and samples in a single report


  • KOBAS 2.0: A web server for annotation and identification of enriched pathways and diseases


  • GSVA: Gene set variation analysis for microarray and RNA-Seq data


  • GSVA: gene set variation analysis


  • GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes


  • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles


  • featureCounts: an efficient general purpose program for assigning sequence reads to genomic features


  • fastp: an ultra-fast all-in-one FASTQ preprocessor


  • Dynamic TF-lncRNA Regulatory Networks Revealed Prognostic Signatures in the Development of Ovarian Cancer


  • DIANA-miRPath v3.0: deciphering microRNA function with experimental support


  • clusterProfiler 4.0: A universal enrichment tool for interpreting omics data


  • A chromosome-level draft genome of the grain aphid Sitobion miscanthi


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