【哈佛大学】RNA-Seq, ChIP-Seq, and DNA methylation data analyses视频搬运目录

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最后一次更新2020.12.04

• Section 1: RNA-seq
  • Introduction to RNA sequencing
    • 1.1.1 Introduction to RNA-seq
    • 1.1.2 Data generation and counts
    • 1.1.3 Model for Quantification
    • 1.1.4 Transcript Quantification
    • 1.1.5 Unstable Quantification
  • RNA-seq alignment
    • 1.2.1 Downloading FASTQ files（已更新）
    • 1.2.2 First look at a FASTQ file(已更新)
    • 1.2.3 Quality control with FASTQC
    • 1.2.4 Genome alignment with STAR I
    • 1.2.5 Genome alignment with STAR II
    • 1.2.6 Integrative Genomics Viewer (IGV)
    • 1.2.7 Transcriptome alignment with RSEM I
    • 1.2.8 Transcriptome alignment with RSEM II
    • 1.2.9 Normalization and EDA of gene counts
    • 1.2.10 Differential expression at gene-level
    • 1.2.11 Differential expression across isoforms
• Section 2: DNA Methylation
  • Introduction to DNA methylation
  • DNA Methylation Measurement
  • Data Analysis and Integration
  • Whole Genome Analysis
• Section 3: ChIP-seq
  • Introduction to ChIP-seq
  • Advanced ChIP-seq Analysis

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