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最后一次更新2020.12.04
- Section 1: RNA-seq
- Introduction to RNA sequencing
- 1.1.1 Introduction to RNA-seq
- 1.1.2 Data generation and counts
- 1.1.3 Model for Quantification
- 1.1.4 Transcript Quantification
- 1.1.5 Unstable Quantification
- RNA-seq alignment
- 1.2.1 Downloading FASTQ files(已更新)
- 1.2.2 First look at a FASTQ file(已更新)
- 1.2.3 Quality control with FASTQC
- 1.2.4 Genome alignment with STAR I
- 1.2.5 Genome alignment with STAR II
- 1.2.6 Integrative Genomics Viewer (IGV)
- 1.2.7 Transcriptome alignment with RSEM I
- 1.2.8 Transcriptome alignment with RSEM II
- 1.2.9 Normalization and EDA of gene counts
- 1.2.10 Differential expression at gene-level
- 1.2.11 Differential expression across isoforms
- Section 2: DNA Methylation
- Introduction to DNA methylation
- DNA Methylation Measurement
- Data Analysis and Integration
- Whole Genome Analysis
- Section 3: ChIP-seq
- Introduction to ChIP-seq
- Advanced ChIP-seq Analysis
edx哈佛大学课程链接