Skip to content

nextflow缓存的问题

生信小木屋

Mar-17 09:09:32.392 [Actor Thread 54] 
    INFO  nextflow.processor.TaskProcessor - 
    [6e/c88da8] Cached process > BOWTIE2TWINS (YH4_T1)
Mar-17 09:09:32.850 [Task submitter] 
    DEBUG nextflow.executor.GridTaskHandler - 
    [SLURM] submitted process BOWTIE2TWINS (DH4_T1) > 
    jobId: 579084; 
    workDir: /data/metagenomics/pml_nextflow/work/7e/184f076728f7fca360e15c152ce81e


Mar-17 09:09:32.850 [Task submitter] 
    INFO  nextflow.Session - 
    [7e/184f07] Submitted process > BOWTIE2TWINS (DH4_T1)

Mar-17 09:09:56.408 [Task monitor] 
    DEBUG n.processor.TaskPollingMonitor - 
    Task completed > TaskHandler[
        jobId: 579084; 
        id: 180; 
        name: BOWTIE2TWINS (DH4_T1); 
        status: COMPLETED; 
        exit: 0; 
        error: -; 
        workDir: /data/metagenomics/pml_nextflow/work/7e/184f076728f7fca360e15c152ce81e 
        started: 1679015376405; 
        exited: 2023-03-17T01:09:55.108408Z; 
    ]

nextflow流程恢复的故障排除

Troubleshooting Nextflow resume

不确定的通道输入

cache源码